Insertion junction: CLIP2.056668_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.056668
Chromosome:chromosome 6
Location:1502037
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g260650 (1 of 2) PTHR31362//PTHR31362:SF0 - FAMILY NOT NAMED // PROTEIN E03H4.4-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCTAGTTCGGACTTCGGACTGCTCGCCGACATCGCGCATGGAGAGTCC
Internal bar code:AGTCCCGTCACATAAGGCATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2969
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTTGTGCCCAGACAAAAG
Suggested primer 2:ATTACACGTCCGGCAGGTTT