Insertion junction: CLIP2.056672_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.056672
Chromosome:chromosome 12
Location:8189703
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g551800 (1 of 2) 3.6.1.17 - Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) / Dinucleosidetetraphosphatase (asymmetrical) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGTGTGGTAGGGTAGAGTGGAGGCAGTCTATTCCTGTGCTCATGGCAC
Internal bar code:TATAAGTGCCTGCTGCCATTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1582
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGGAAGGCTGAGTGGAT
Suggested primer 2:GACGATGACGACGATGACGA