Insertion junction: CLIP2.056675_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.056675
Chromosome:chromosome 6
Location:7382653
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g300100 PIA1,PIG-L (1 of 1) 3.5.1.89 - N-acetylglucosaminylphosphatidylinositol deacetylase / N-acetylglucosaminylphosphatidylinositol de-N-acetylase; N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein 3'UTR
Cre06.g300139 (1 of 7) IPR010995 - DNA repair Rad51/transcription factor NusA, alpha-helical 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGACCGCCTCGCTCAGAAGCGTCTGCCGGATTGAGGCATAGAGAGACAC
Internal bar code:GACCTCCTGGGCGGAAGAAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1974
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGCGTGAGGAATTTGGAG
Suggested primer 2:TGCTACGGGTGAGGACCATA