Insertion junction: CLIP2.056681_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.056681
Chromosome:chromosome 3
Location:1416755
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g150850 (1 of 2) IPR002867//IPR013083//IPR031127 - IBR domain // Zinc finger, RING/FYVE/PHD-type // E3 ubiquitin ligase RBR family 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGACTGACTGGCCCCTTCGCCGGCACCAGTACCGGTATCCCACCGAA
Internal bar code:GTTTTGATGTATACGCTAAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2940
LEAP-Seq percent confirming:75.3247
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGCAACTTCTGAGGTGGG
Suggested primer 2:TGTGGTTGCTGGACTTGTGT