Insertion junction: CLIP2.056686_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.056686
Chromosome:chromosome 7
Location:6403667
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g357700 3'UTR
Cre07.g800876 (1 of 1) PTHR10383:SF9 - TMS1, ISOFORM F 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATAGTCGGCTAGCTGGATTCCGGTGTCCTGGCGTAACAATCTAGGGCGC
Internal bar code:CGTGCGCAACTCTGAGGTGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2126
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGATTCAGAGCGCGGATG
Suggested primer 2:ACCCACAACGTGCTTCCTAG