Insertion junction: CLIP2.056703_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.056703
Chromosome:chromosome 3
Location:4095846
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g172322 (1 of 3) PTHR15439//PTHR15439:SF4 - RETINOBLASTOMA-BINDING PROTEIN 6 // ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 24 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTACGGACGCAGCAAGCCGGCCACCTCACTCCTTGCCTCACTCGTGCA
Internal bar code:TGGGGCTCACTTTAAGGGTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1048
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGCCTTGGTTGTGCATTG
Suggested primer 2:ATGATGGTATCGTGTCGGGC