Insertion junction: CLIP2.056712_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056712
Chromosome:plastome
Location:89944
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802300 rps18,ChreCp036,2717007 (1 of 2) PF01084 - Ribosomal protein S18 (Ribosomal_S18); 30S ribosomal protein S18 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAACGACGATTATAAAGAGTTTTTTCAGGTTTTTCTTTAAGAACAATTAC
Internal bar code:ATAGATCGGGCATTGGTTGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:198
LEAP-Seq percent confirming:5.26316
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:ACAAATTGCAGCCCCTCAGT
Suggested primer 2:GAAGGGGAAGGACGTCAGTG