Insertion junction: CLIP2.056717_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056717
Chromosome:chromosome 17
Location:1350180
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g705843 Chlamydomonas-specific family W protein; (1 of 6) PF06701 - Mib_herc2 (MIB_HERC2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTTTCTGTGTGCTGCGTGTGGGTAGTGGGCGGCGGGGTGGTGCGCGGC
Internal bar code:CTCTAAGCTCCAGTCAATAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4436
LEAP-Seq percent confirming:80.3571
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTGCGCATATGCAAGGAA
Suggested primer 2:GAGATAGAGGCGGTGCAGTC