Insertion junction: CLIP2.056719_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.056719
Chromosome:chromosome 12
Location:7119096
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g559700 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAAGGGCAGCGCACCGACAGCAGCCAAACGGGCTGAGAGTGGAGAACG
Internal bar code:TGTCACCTTGTTAACAGTACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2132
LEAP-Seq percent confirming:20.202
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:79
LEAP-Seq n unique pos:99

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCACGTTCCAAACCTGTT
Suggested primer 2:GCCTTGTCACGTTCCCAAAC