Insertion junction: CLIP2.056721_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.056721
Chromosome:chromosome 17
Location:3060932
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g720183 (1 of 1) K08998 - hypothetical protein (K08998) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATACACCTACTGCCGCGACGCCGGCTAAGGTGGCATGTAATCCAGATAG
Internal bar code:TCGGGGATAGGTTATTCTTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1712
LEAP-Seq percent confirming:85.567
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTCTTGTCCAGAGCGGTC
Suggested primer 2:GCTAGGTTGTGAGTGCCTGT