Insertion junction: CLIP2.056726_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056726
Chromosome:chromosome 16
Location:1535953
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g653338 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGGTGCAAAAAGGCGGGAACAGCTGGTCGGCAAACCAATAGTTGTCGC
Internal bar code:GAACCAATCCAGAGGAGGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:706
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTACCAGCTTCAATCGCA
Suggested primer 2:GTATGAAGAGGACGAGGGCG