Insertion junction: CLIP2.056726_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.056726
Chromosome:chromosome 16
Location:1536124
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g653338 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCATTCCATCCTTTCGCCGGTGTGCCGAGTATAGCCCAGTGAACTTTG
Internal bar code:TTCACTGCTCAACGTACATTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1125
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GTATGAAGAGGACGAGGGCG
Suggested primer 2:ACGTACCAGCTTCAATCGCA