Insertion junction: CLIP2.056741_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056741
Chromosome:chromosome 11
Location:850775
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467645 (1 of 2) PTHR10540:SF8 - COP9 SIGNALOSOME COMPLEX SUBUNIT 6 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTGAAGTGGCAAAGCGGTGCACAGACTCCAAATCTGGGGGAGAGACAT
Internal bar code:CGGGGTGTTGTGTGGTTTCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1347
LEAP-Seq percent confirming:85.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TCGATGGCACGGAACAGAAA
Suggested primer 2:ACGTCCACCGGTTTCCATAC