Insertion junction: CLIP2.056743_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.056743
Chromosome:plastome
Location:10723
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802266 2716978,psbK,ChreCp004 (1 of 1) K02712 - photosystem II PsbK protein (psbK); photosystem II K protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAAGGATATTAACAGGCTAAAAAATTAACGGAAACTAACAGCTGCTTGC
Internal bar code:GACGTATTACTTGTTCTTGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:400
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:CATAGGGTCGCAGGTTCGAA
Suggested primer 2:ACCAACTGAACCACCAGCTG