Insertion junction: CLIP2.056745_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.056745
Chromosome:chromosome 12
Location:4680846
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g522450 SEC31 (1 of 1) K14005 - protein transport protein SEC31 (SEC31); COP-II coat subunit 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACTTATCCCGGAAATGCGTGAGACTGCCCACCACATGGCGCGAACTCC
Internal bar code:CTTGGGACTTGCTTGAACGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2505
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:AATGATCCCCCACAGCCAAG
Suggested primer 2:GATCATCCGCCCTCTTCTGG