Insertion junction: CLIP2.056748_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056748
Chromosome:chromosome 17
Location:3943913
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728050 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCAATACGCAGTCCGCGTACGTGCCCCATGCCACCACGTGCCATGCTCA
Internal bar code:AACCAGGTATATGAGACTGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3960
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:GACGGGTTTGCCAGTAAGGA
Suggested primer 2:TGCCCTCTCATCCATCTCCA