Insertion junction: CLIP2.056751_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.056751
Chromosome:chromosome 12
Location:454197
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g494800 DII1,IDA-IC28,IDA4,p28IDA4 (1 of 1) K10410 - dynein light intermediate chain, axonemal (DNALI); Flagellar inner arm dynein light chain p28 5'UTR
Cre12.g494850 ADK3 Adenylate kinase; (1 of 1) PTHR23359//PTHR23359:SF72 - NUCLEOTIDE KINASE // ADENYLATE KINASE FAMILY PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTAAGTTGTAGCGCGTCAAACCTTCGCGATGTTGCGAGGGCGACGCTG
Internal bar code:GTCGAGCTACATGATACTCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1897
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTGTTGTGTTGTCAGGC
Suggested primer 2:CATCAAACGTCTGCGCGTAG