Insertion junction: CLIP2.056761_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.056761
Chromosome:chromosome 17
Location:4043403
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728550 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTTATCGATTACTGTACTCTCAAGTCTAGGTCTGTCGTGCCTGGTGCG
Internal bar code:CAGAATGCTTTGCTCTTAACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1670
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTGAGAAAAGCCGTGGAC
Suggested primer 2:TCGGCACACGGATTGTAACA