Insertion junction: CLIP2.056764_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.056764
Chromosome:chromosome 10
Location:3381775
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g443750 (1 of 8) IPR003117 - cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACAACGAATGTTGACAAAGTCGTCAAGGAGATGGTTGTGTCGGTGCTT
Internal bar code:ACGTCTTCGGGCGACCGTATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:648
LEAP-Seq percent confirming:6.25
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTCGTGTCTCTGGTTTGG
Suggested primer 2:CACTGATCGATGCTTTGCCG