Insertion junction: CLIP2.056769_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.056769
Chromosome:chromosome 17
Location:1877771
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g709600 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACTCGTATAAGGAAAGCCGCCAGGGGAACGCATGGGACTGACATGAGC
Internal bar code:ATCTGTCGTCTTTGCCTTGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2589
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:GCATTGGGCACTTGCGATAG
Suggested primer 2:TGTACCACTTCCTTCGGCAC