Insertion junction: CLIP2.056777_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056777
Chromosome:chromosome 1
Location:3729135
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g024251 (1 of 1) PF00270//PF00271//PF04408 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Helicase associated domain (HA2) (HA2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATAATAATATGAGTTGGTGCAATTAAGTTGCTGCAATTGGGTATCGCAG
Internal bar code:AGGGCAGCGTGCAATCAACCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:6627
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:CACACGACGGTACTGGTGAA
Suggested primer 2:GACCTCTATCTCTGCACGGC