Insertion junction: CLIP2.056780_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.056780
Chromosome:chromosome 17
Location:5201063
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g736950 (1 of 1) PF11265 - Mediator complex subunit 25 von Willebrand factor type A (Med25_VWA) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCATCTTGACACGATATATCATACCTTGCGGATTGCCAAGTTGCGCAGT
Internal bar code:GGTGAACGACTATGGTCATGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1938
LEAP-Seq percent confirming:65.625
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GTATGGGCGCTTGCTTGATG
Suggested primer 2:ACGCCATCCTATCATCAGCG