Insertion junction: CLIP2.056782_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.056782
Chromosome:chromosome 10
Location:1721028
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g430050 UBC20 E2 Ubiquitin conjugating enzyme; (1 of 1) K10583 - ubiquitin-conjugating enzyme E2 S (UBE2S, E2EPF) 3'UTR
Cre10.g430100 ELG22 Exostosin-like glycosyltransferase 22; (1 of 6) IPR000742//IPR004263//IPR009030 - EGF-like domain // Exostosin-like // Insulin-like growth factor binding protein, N-terminal 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCGCCCAGGATTGCTCTGATGACCGGGTAGCGTGGCCCCGTTACCTG
Internal bar code:CTCCTTCATGGTAGGGATTCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4144
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGCATGAGAGCTGACGT
Suggested primer 2:GGATCAAACGCCGTATTGCC