Insertion junction: CLIP2.056796_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.056796
Chromosome:chromosome 3
Location:6806507
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g197200 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACTTCGCGGGTTGCATGTAAAGCCTAATTGTTTACCCCCCCCCCCCGG
Internal bar code:ACTTTACCTCGACTGAGCATCC

Confirmation - LEAP-Seq

LEAP-Seq distance:731
LEAP-Seq percent confirming:30.7692
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:AATGGATGCCCGTCGAAGTT
Suggested primer 2:CACTGCGCCGCTTCTATTTC