Insertion junction: CLIP2.056802_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.056802
Chromosome:chromosome 6
Location:5258886
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g284300 (1 of 7) IPR000048//IPR027417 - IQ motif, EF-hand binding site // P-loop containing nucleoside triphosphate hydrolase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAAAGAAATGTAGGCGCCATCACCCTTGAGGCGCCATTGACTCCTGTC
Internal bar code:CTTATGGTTGCATGGCCACCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:905
LEAP-Seq percent confirming:8.82353
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGTGTGTGTGTGCTCT
Suggested primer 2:TATCCTCGTTTGTGGGTGCC