Insertion junction: CLIP2.056806_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.056806
Chromosome:chromosome 2
Location:3921301
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre02.g101950 TRM2B,TMU2 tRNA (uracil-5)-methyltransferase; (1 of 1) K15332 - tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-] (TRMT2A) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCACAGGGCATCCCAGGCAACGCCTAGAAGCACGACCAGGCCCGACGCC
Internal bar code:ACCGGACGCCCGGCCAAGATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:638
LEAP-Seq percent confirming:43.4783
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTCCTCACCCCTACATCC
Suggested primer 2:GGGGGTTTGCAGGTGTAAGT