Insertion junction: CLIP2.056811_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.056811
Chromosome:chromosome 17
Location:5373189
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g738350 PGA5,LPAAT2 ER 1-acyl-sn-glycerol-3-phosphate acyltransferase; (1 of 2) PTHR10434 - 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTCTAGGTAGTAAACATGTCCGTGCTCACAAAGTTGCTGGGCCTGCC
Internal bar code:TGACTCGGGGTCTTAGATTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1313
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGAGGTCAACAGGTTGCT
Suggested primer 2:CAATGTGACAACACCGCGTT