Insertion junction: CLIP2.056816_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.056816
Chromosome:chromosome 2
Location:4049861
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g103200 (1 of 7) PF00211//PF13416 - Adenylate and Guanylate cyclase catalytic domain (Guanylate_cyc) // Bacterial extracellular solute-binding protein (SBP_bac_8) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTAGGAATGCGAGTAATTGCGGGTTAATACCAGGGCGTAAGCAATGCC
Internal bar code:CCAGCCTAAGTTGGGGGTTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2312
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:105
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:108

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGTGATACTAGTGCCGCT
Suggested primer 2:AACGTGGAGGGAGATGCTTG