Insertion junction: CLIP2.056822_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.056822
Chromosome:chromosome 17
Location:861894
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g702250 TRP4 Transient receptor potential ion channel protein; (1 of 6) PTHR10582 - TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN 3'UTR
Cre17.g702300 (1 of 2) PF04930 - FUN14 family (FUN14) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGTGACCCGGGCAATTGTGACCCGGGCGGACGCACCTGACCTATGGGA
Internal bar code:GCAGTACTTCTTCCCGGTCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:914
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGTGACCTGCATTGTTTT
Suggested primer 2:GGTTAGAGGGGACTTGGTGC