Insertion junction: CLIP2.056827_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.056827
Chromosome:chromosome 16
Location:2019441
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g656851 (1 of 2) PF07856 - Mediator of CRAC channel activity (Orai-1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGGGTTGCCACATTCCCCACTTACATTTCCCTTCAGAAGTGCACTCAG
Internal bar code:TTGATGTGGGGCCGTTTAATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5676
LEAP-Seq percent confirming:75.8621
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGTACGCTGAGGATACGG
Suggested primer 2:AAGCTCTCGTGGGAGTTGTG