Insertion junction: CLIP2.056838_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.056838
Chromosome:chromosome 15
Location:963238
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g639600 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCTGCGCCGTGTGCGTGCCTGCGTCAGTGTGCGTGGCCCTCCCCCTCC
Internal bar code:GCTAAACGAGTACGTATGACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:196
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGCGACCTCAAATCTACT
Suggested primer 2:TGCAACAACTTACAACGCCG