Insertion junction: CLIP2.056841_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.056841
Chromosome:chromosome 3
Location:1683464
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g153100 (1 of 39) IPR016040 - NAD(P)-binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACAGACTGCTGAAGGACCTAGTGCGCCGTTGCTGCACCTTTACAGCTA
Internal bar code:CTCATGTTAGTGGATCCAGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1378
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AATGCCTTACTTCGCCAGCT
Suggested primer 2:GTGCCCGGTCAAGTTTTGTC