Insertion junction: CLIP2.056857_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056857
Chromosome:chromosome 13
Location:955096
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre13.g568150 CMAL1,SMM45,CMAL S-adenosyl-L-methionine-dependent methyltransferase; (1 of 1) 2.1.1.199 - 16S rRNA (cytosine(1402)-N(4))-methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAATGCCGTACAGCTGCCCCGCCCCGCGAGCTTTCGCGGGCAGGTGTGAA
Internal bar code:TCATAGGCGCAGCTATTTTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:823
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGCTTTTCTGGACGAGCT
Suggested primer 2:GGGTCCCAAATGTTTGTGCC