Insertion junction: CLIP2.056859_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056859
Chromosome:chromosome 14
Location:1994641
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre14.g620850 NSG17 (1 of 9) PF00010 - Helix-loop-helix DNA-binding domain (HLH); Basic helix-loop-helix transcription factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTTCAAGGACCAAAGCACCAAAATGCAGCCAACATCGCTGACCGGACG
Internal bar code:GACGCCGATGGAATGTAGGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1099
LEAP-Seq percent confirming:23.5294
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TCAAAAACGCGAGCACTTGG
Suggested primer 2:TAAAGCACCTGCCCTGATGG