Insertion junction: CLIP2.056861_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.056861
Chromosome:chromosome 16
Location:2272799
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g658700 FAP376 (1 of 3) PF01661 - Macro domain (Macro); Flagellar Associated Protein 376 with ADP-ribose binding site 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGGTCGCTCAGAGACGCTCCAAGAGCACGTTTGTACGGAAGTAGATAG
Internal bar code:GTGAATTAGAGGTTCGGTCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2165
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCCGGTTCATGTAGCTG
Suggested primer 2:CAAGGTTGTGGCGTTGTGAG