Insertion junction: CLIP2.056861_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.056861
Chromosome:chromosome 16
Location:2272804
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g658700 FAP376 (1 of 3) PF01661 - Macro domain (Macro); Flagellar Associated Protein 376 with ADP-ribose binding site 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCTGGCACTACTAAATTTTCAGCACGCAGGGCGTGCGCTCGCTAGAGT
Internal bar code:GAATCCTCTTGTATCAAAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2020
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGGTTGTGGCGTTGTGAG
Suggested primer 2:ACACCCGGTTCATGTAGCTG