Insertion junction: CLIP2.056867_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056867
Chromosome:chromosome 6
Location:3594818
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278131 (1 of 1) IPR000104//IPR002083//IPR008974 - Antifreeze protein, type I // MATH/TRAF domain // TRAF-like 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTTCTCCACACCTCCCACCCCGCCCAACACGCTGCCCTGCCAAGCCC
Internal bar code:AGTTAATTATTCAGAACACGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1063
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGATGTCGAGCGGTCTAG
Suggested primer 2:GCCGTTGGGGTACAGAATGA