Insertion junction: CLIP2.056871_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056871
Chromosome:chromosome 2
Location:7479357
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392505 (1 of 4) PTHR22849//PTHR22849:SF39 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED 3'UTR
Cre09.g392542 (1 of 1) K11423 - histone-lysine N-methyltransferase SETD2 (SETD2, SET2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGTTACATGCAAGCCCGCGCCACACGCCACACCCACAATACTTCCCACA
Internal bar code:TGAAGAGGGCCCATCTGATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1502
LEAP-Seq percent confirming:43.3333
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGTGTTTTACGTGTGCGC
Suggested primer 2:GGCCTTTGCTTGCTTCACTC