Insertion junction: CLIP2.056874_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056874
Chromosome:chromosome 7
Location:5908063
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g354050 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCTGCCGCGGTGGGTCAGACAAGGAAACGCGACAACTGAGCGATGCTG
Internal bar code:TGAATACAGATGACGCCCAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2683
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:95
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:95

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTACTCCACACACTCCAC
Suggested primer 2:CGCGGTATCATGTGCTGTTG