Insertion junction: CLIP2.056877_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056877
Chromosome:chromosome 17
Location:1700041
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g708100 (1 of 3) 2.4.2.8 - Hypoxanthine phosphoribosyltransferase / Transphosphoribosidase; Similar to Hypoxanthine-Guanine outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCATATTGAGCACAGCGCAAGTGAAGTACGGCATACCCCGAAGTTGT
Internal bar code:TCAGTAAAAACAATTACAATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4150
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:93
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTCTGACAGCTCCGTATC
Suggested primer 2:GCATCCCCTACATCGGTGAG