Insertion junction: CLIP2.056879_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.056879
Chromosome:chromosome 6
Location:3655026
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278145 gene_edge/mRNA_edge/5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACACTAGTGTGGGCCTGTGCGTCGGTTCGCGGCTGGACGGACCGCACGG
Internal bar code:ACTAAAACCGATACATTATTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1433
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:GCACCAGGTTGCAAAGACAG
Suggested primer 2:GAAAAAGTGAGCGCAGGCAA