Insertion junction: CLIP2.056890_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.056890
Chromosome:chromosome 13
Location:2680363
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g581500 OPR41 OctotricoPeptide Repeat protein 41 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTAAAGCGTGCAGCCATACGGCATGTCACTTGTACTAATGCACAGGCGC
Internal bar code:CTACTTGACGGGTCTCGCCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1914
LEAP-Seq percent confirming:92.1053
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTCACAACTTTCGCAGCG
Suggested primer 2:AGGAGCCACACATTACCACG