Insertion junction: CLIP2.056894_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.056894
Chromosome:chromosome 4
Location:1059618
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217991 (1 of 12) IPR001680//IPR015943//IPR017986 - WD40 repeat // WD40/YVTN repeat-like-containing domain // WD40-repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCGATGGGGTGCTTAGTGCTGGTTCCAGTATGCAGGCGGTTTCGCTG
Internal bar code:AGCTCGCCCCTAGTAGGCTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1768
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:130
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:130

Suggested primers for confirmation by PCR

Suggested primer 1:CGTAGTCCATGTAGGCCGTC
Suggested primer 2:GTGCAACAGGGGTAGTCTCC