Insertion junction: CLIP2.056899_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.056899
Chromosome:chromosome 13
Location:62203
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g562200 (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATACAGCGGTTCAGATGTAGCGTGAAACTGCTAGAGCAAAACAATACAA
Internal bar code:TATACCTTGCTCGTGGACTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:987
LEAP-Seq percent confirming:23.8095
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTCAGATGCTGATGCGTG
Suggested primer 2:GTTGGAGAACAGCTTGACGC