Insertion junction: CLIP2.056899_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.056899
Chromosome:chromosome 13
Location:62204
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g562200 (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATATTAGCTGGCTCGGTATTCTCGGCAACACTAAAAGACTGAGGCGCTT
Internal bar code:TATACCTTGCTCGTGGACTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2410
LEAP-Seq percent confirming:98.1132
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGGAGAACAGCTTGACGC
Suggested primer 2:GCTTCAGATGCTGATGCGTG