Insertion junction: CLIP2.056905_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.056905
Chromosome:chromosome 16
Location:276422
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g694250 (1 of 18) PF12937 - F-box-like (F-box-like) 5'UTR
Cre16.g694300 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAATTGCACAGGGGCGACGACGATCGCGACATAAACGCGATTGCTCTA
Internal bar code:GCTCTATCCGCTGTGGGCCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:748
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:ATTTGCAACGCGTGAGTGAC
Suggested primer 2:CTCACGCATACACGCACATG