Insertion junction: CLIP2.056906_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056906
Chromosome:chromosome 8
Location:3708247
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g380300 MSRA3 (1 of 1) PTHR10173//PTHR10173:SF30 - METHIONINE SULFOXIDE REDUCTASE // SUBFAMILY NOT NAMED; Peptide methionine-S-sulfoxide reductase, msrA-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACATTTGCGTTGGCACGCGGACGCATCCCCCATCCTCCAACAACGCATT
Internal bar code:CTAATTCATCGCGCTACAGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1774
LEAP-Seq percent confirming:60.6742
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:89

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCTCATGCCGTTTCCTCT
Suggested primer 2:CATACCGTCGTAGTCCTGCC