Insertion junction: CLIP2.056908_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.056908
Chromosome:chromosome 2
Location:1734022
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g086200 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGATTACACTACACCGTTAAAAATTGTCCCGAAAACCAATAGTCGCGG
Internal bar code:TGCTGTTTCGGCGTTCGAACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1925
LEAP-Seq percent confirming:80.5556
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CTTACAGCCGGGAAGAACGT
Suggested primer 2:AGTTCTCGCCCCTTGAAGTG