Insertion junction: CLIP2.056909_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056909
Chromosome:chromosome 6
Location:4917766
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g280900 VTI2,GOS1 (1 of 1) K08495 - golgi SNAP receptor complex member 1 (GOSR1, GOS1); Intra-Golgi Qb-SNARE, Gos1/Gos28-family (Qb.II) 3'UTR
Cre06.g280950 PYK2 Pyruvate kinase 2; (1 of 6) 2.7.1.40 - Pyruvate kinase / Phosphoenolpyruvate kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCTGCGCCCCTCCCCAGCTATTGGATTACTCGCTCAGAGCCCAGACCC
Internal bar code:CGATAGAGTGTAGCATATGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3018
LEAP-Seq percent confirming:98.5714
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGTTGGGGGTGACATGC
Suggested primer 2:TGAGTGACGGTGTGACGAAG