Insertion junction: CLIP2.056911_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.056911
Chromosome:chromosome 6
Location:905704
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g255950 (1 of 1) K14553 - U3 small nucleolar RNA-associated protein 18 (UTP18) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCGGACCCTGCAAAGCATCCACCAGCAAGCCTTTTGCCCTGCACCTAC
Internal bar code:TATGGACGGTGATGGGAATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:117
LEAP-Seq percent confirming:46.6667
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGACGACCAATGTGGACA
Suggested primer 2:CCGATCCAGACTCTTACGCC